Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Lire1P11260 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Lire1P11260 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.05□□□□□ -1.44
Lire1P11260 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.05□□□□□ -1.44
Lire1P11260 Gm11617-201ENSMUST00000119609 639 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm13357-201ENSMUST00000120528 537 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm14070-201ENSMUST00000120773 428 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm11581-201ENSMUST00000122024 763 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Gm25904-201ENSMUST00000158491 143 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 Trbv10-201ENSMUST00000168322 289 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm29475-201ENSMUST00000190767 312 ntBASIC6.05□□□□□ -1.44
Lire1P11260 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Gm2229-201ENSMUST00000193328 710 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm43089-201ENSMUST00000199162 275 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.05□□□□□ -1.44
Lire1P11260 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.05□□□□□ -1.44
Lire1P11260 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.05□□□□□ -1.44
Lire1P11260 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.05□□□□□ -1.44
Lire1P11260 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 Gm24621-201ENSMUST00000082679 140 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lire1P11260 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.05□□□□□ -1.44
Lire1P11260 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.05□□□□□ -1.44
Lire1P11260 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lire1P11260 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Lire1P11260 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Mir760-201ENSMUST00000103257 119 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lire1P11260 Gm23748-201ENSMUST00000104227 131 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm8692-201ENSMUST00000118102 438 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Gm24383-201ENSMUST00000122691 333 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Gm23903-201ENSMUST00000157566 131 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm23891-201ENSMUST00000158114 138 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Lire1P11260 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.04□□□□□ -1.44
Lire1P11260 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.04□□□□□ -1.44
Lire1P11260 Gm18529-201ENSMUST00000193025 1257 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm6077-201ENSMUST00000196008 499 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm9504-201ENSMUST00000196322 468 ntBASIC6.04□□□□□ -1.44
Lire1P11260 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Gm44571-201ENSMUST00000208092 533 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms