Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm23027-201ENSMUST00000158771 158 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm20549-201ENSMUST00000174804 429 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm9167-201ENSMUST00000182469 962 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm27044-201ENSMUST00000183033 796 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm3121-201ENSMUST00000187086 406 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm9541-201ENSMUST00000188409 502 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm29600-201ENSMUST00000188687 377 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm37493-201ENSMUST00000193167 433 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm18430-201ENSMUST00000197534 682 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm43436-201ENSMUST00000199308 147 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm42558-201ENSMUST00000200982 265 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm36378-201ENSMUST00000201709 388 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm45198-201ENSMUST00000206796 591 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm18781-201ENSMUST00000211252 924 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm19011-201ENSMUST00000221777 808 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm35619-201ENSMUST00000222548 600 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC144628.1-201ENSMUST00000227943 466 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Thap6-201ENSMUST00000191860 3151 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 AC132336.1-201ENSMUST00000222844 1740 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm23834-201ENSMUST00000104436 129 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm11498-201ENSMUST00000120660 949 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm24782-201ENSMUST00000157641 132 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm23222-201ENSMUST00000158117 76 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Mir1264-201ENSMUST00000175381 86 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm24923-201ENSMUST00000178201 88 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms