Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm15732-201ENSMUST00000079794 480 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Mir711-201ENSMUST00000102188 82 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm22710-201ENSMUST00000116892 125 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Mup-ps21-201ENSMUST00000119998 448 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm12444-201ENSMUST00000121512 877 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm22235-201ENSMUST00000157085 110 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm26037-201ENSMUST00000158150 311 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm17164-201ENSMUST00000169013 506 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm20454-201ENSMUST00000172713 221 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm25244-201ENSMUST00000178089 132 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm27804-201ENSMUST00000185135 119 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm38280-201ENSMUST00000192610 158 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm20128-201ENSMUST00000196189 417 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm29784-201ENSMUST00000196217 406 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm45626-201ENSMUST00000210093 361 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm4556-201ENSMUST00000217808 355 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm9267-201ENSMUST00000222831 404 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.78□□□□□ -1.32
Ddx56Q9D0R4 Gm12586-201ENSMUST00000117328 1316 ntBASIC6.77□□□□□ -1.32
Ddx56Q9D0R4 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Ddx56Q9D0R4 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm25647-201ENSMUST00000101832 78 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm25823-201ENSMUST00000101995 78 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm11920-201ENSMUST00000118491 563 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm5871-201ENSMUST00000176461 718 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm24220-201ENSMUST00000177753 79 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm25988-201ENSMUST00000177759 79 ntBASIC6.77□□□□□ -1.33
Ddx56Q9D0R4 Gm23471-201ENSMUST00000177886 79 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms