Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scrt1Q99M85 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scrt1Q99M85 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scrt1Q99M85 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
Scrt1Q99M85 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scrt1Q99M85 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scrt1Q99M85 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scrt1Q99M85 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scrt1Q99M85 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scrt1Q99M85 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm8855-201ENSMUST00000118888 878 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm14294-201ENSMUST00000119749 751 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm6808-201ENSMUST00000162341 807 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Mir6367-201ENSMUST00000183385 102 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm9480-201ENSMUST00000198038 616 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm7825-201ENSMUST00000204046 416 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm4548-201ENSMUST00000208487 509 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm17997-201ENSMUST00000211801 840 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Mir337-201ENSMUST00000083592 97 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.35□□□□□ -1.55
Scrt1Q99M85 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.35□□□□□ -1.55
Scrt1Q99M85 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm24216-201ENSMUST00000158259 117 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm37265-201ENSMUST00000191698 885 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm43054-201ENSMUST00000199495 884 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm4374-201ENSMUST00000204929 424 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm45874-201ENSMUST00000212423 346 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm28392-201ENSMUST00000077630 393 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Mir143-201ENSMUST00000083511 63 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms