Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm26416-201ENSMUST00000104280 134 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm15981-201ENSMUST00000119196 457 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Mir1929-201ENSMUST00000158635 93 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm22116-201ENSMUST00000158791 141 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm23617-201ENSMUST00000175410 95 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm27005-201ENSMUST00000182783 921 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm27178-201ENSMUST00000184962 340 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm18342-201ENSMUST00000186987 694 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm2427-201ENSMUST00000189121 881 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm37030-201ENSMUST00000194254 295 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm29747-201ENSMUST00000194764 585 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm43744-201ENSMUST00000196387 688 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm43084-201ENSMUST00000200696 947 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm19092-201ENSMUST00000209036 969 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm18377-201ENSMUST00000215141 607 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 n-R5s205-201ENSMUST00000083149 125 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm24451-201ENSMUST00000083353 133 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm37250-201ENSMUST00000194919 2388 ntBASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ccdc9Q8VC31 Gm37738-201ENSMUST00000192396 4716 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm13423-201ENSMUST00000117205 888 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm15621-201ENSMUST00000119162 364 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm29470-201ENSMUST00000188007 696 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm37659-201ENSMUST00000194574 111 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm4525-201ENSMUST00000198831 254 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm45610-201ENSMUST00000209227 784 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm8189-203ENSMUST00000211159 1225 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm46311-201ENSMUST00000217971 203 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm24411-201ENSMUST00000083428 131 ntBASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc9Q8VC31 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms