Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28bQ8CEG5 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28bQ8CEG5 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.9□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28bQ8CEG5 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.9□□□□□ -1.47
Ccdc28bQ8CEG5 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.9□□□□□ -1.47
Ccdc28bQ8CEG5 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm11212-201ENSMUST00000118337 618 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13835-201ENSMUST00000118459 685 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm12565-201ENSMUST00000119004 649 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm6987-201ENSMUST00000119319 428 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13493-201ENSMUST00000120318 493 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm15586-201ENSMUST00000121218 528 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm12540-201ENSMUST00000121938 319 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Mir1903-201ENSMUST00000122574 80 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm23077-201ENSMUST00000157854 116 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm29784-201ENSMUST00000196217 406 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm45473-201ENSMUST00000211452 616 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28bQ8CEG5 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm22661-201ENSMUST00000104192 132 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm8644-201ENSMUST00000118619 596 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm23674-201ENSMUST00000157473 131 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm25374-201ENSMUST00000158158 101 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm8185-201ENSMUST00000160999 669 ntBASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28bQ8CEG5 Gm7289-201ENSMUST00000168993 734 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms