Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm6654-201ENSMUST00000118950 348 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm13493-201ENSMUST00000120318 493 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Mir6362-201ENSMUST00000184329 107 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm37784-201ENSMUST00000193233 189 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm4602-201ENSMUST00000203198 308 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm17834-201ENSMUST00000204322 891 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm26442-201ENSMUST00000082588 153 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc38Q8CDN8 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm13768-201ENSMUST00000116469 929 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm22714-201ENSMUST00000116894 78 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm7494-201ENSMUST00000121248 441 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm6264-201ENSMUST00000160802 624 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm5430-201ENSMUST00000182525 915 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm43033-201ENSMUST00000199682 425 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm45156-201ENSMUST00000207255 439 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm8911-201ENSMUST00000213986 652 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc38Q8CDN8 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm14998-201ENSMUST00000120502 495 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm15164-201ENSMUST00000122203 271 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Mir1953-201ENSMUST00000157866 89 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm24081-201ENSMUST00000175177 125 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms