Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm16423-201ENSMUST00000120078 947 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm12293-201ENSMUST00000121898 590 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Mir1945-201ENSMUST00000157919 78 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm22724-201ENSMUST00000158091 127 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm24343-201ENSMUST00000158708 111 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm20453-201ENSMUST00000173968 226 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm6472-201ENSMUST00000178147 651 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm24957-201ENSMUST00000179604 132 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm34768-201ENSMUST00000193884 565 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Alx1Q8C8B0 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm13866-201ENSMUST00000118901 968 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm15801-201ENSMUST00000120920 522 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm25782-201ENSMUST00000122526 289 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm23408-201ENSMUST00000158523 265 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm8783-201ENSMUST00000159764 522 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm30708-201ENSMUST00000202183 312 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm43929-201ENSMUST00000203025 409 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm44432-201ENSMUST00000203342 938 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm31861-201ENSMUST00000204563 672 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm45596-201ENSMUST00000209279 434 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm5582-201ENSMUST00000075251 522 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Alx1Q8C8B0 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.91□□□□□ -1.3
Alx1Q8C8B0 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Alx1Q8C8B0 Gm15660-201ENSMUST00000118997 478 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms