Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm14237-201ENSMUST00000122080 430 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm23149-201ENSMUST00000158837 230 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm27219-201ENSMUST00000184633 742 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm6693-201ENSMUST00000189583 813 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm43467-201ENSMUST00000197441 437 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm5612-201ENSMUST00000053326 375 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm23624-201ENSMUST00000082463 321 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm45562-201ENSMUST00000210015 1537 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ccdc60Q8C4J0 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Xpo7-203ENSMUST00000226448 3663 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm13899-201ENSMUST00000121519 1255 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm3715-201ENSMUST00000172308 617 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm22932-201ENSMUST00000175510 72 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm7166-201ENSMUST00000199715 303 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm44091-201ENSMUST00000205212 649 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 AC132384.3-201ENSMUST00000219709 472 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc60Q8C4J0 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm13428-201ENSMUST00000117540 365 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm14998-201ENSMUST00000120502 495 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm12488-201ENSMUST00000122449 499 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Mir1945-201ENSMUST00000157919 78 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm2058-201ENSMUST00000178791 560 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm42961-201ENSMUST00000202023 181 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm43501-201ENSMUST00000202513 107 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 AC124709.3-201ENSMUST00000227294 171 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm22126-201ENSMUST00000083244 142 ntBASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc60Q8C4J0 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 311.8 ms