Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC122034.1-201ENSMUST00000227641 595 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm43062-201ENSMUST00000196302 1319 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm37621-201ENSMUST00000194716 5531 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm45548-201ENSMUST00000210076 3167 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm22194-201ENSMUST00000116869 95 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Mir466j-201ENSMUST00000116876 122 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm16139-201ENSMUST00000160015 420 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm8419-201ENSMUST00000189886 412 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm45750-201ENSMUST00000211966 354 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 AC168056.2-201ENSMUST00000223591 269 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 AC107711.2-203ENSMUST00000227827 762 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm38325-201ENSMUST00000194507 1377 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm23910-201ENSMUST00000104597 132 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm15660-201ENSMUST00000118997 478 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm24767-201ENSMUST00000158509 95 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm8582-201ENSMUST00000164061 789 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Igkv4-75-201ENSMUST00000197204 359 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp47Q8BY87 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm9269-201ENSMUST00000221661 578 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Gm7042-201ENSMUST00000223027 384 ntBASIC8.35□□□□□ -1.07
Usp47Q8BY87 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp47Q8BY87 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp47Q8BY87 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp47Q8BY87 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm19125-201ENSMUST00000188408 1383 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm37959-201ENSMUST00000191700 2897 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp47Q8BY87 Malat1-201ENSMUST00000172812 6983 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp47Q8BY87 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Usp47Q8BY87 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm14106-201ENSMUST00000119382 438 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm15335-201ENSMUST00000122442 411 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm26372-201ENSMUST00000157831 236 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm8185-201ENSMUST00000160999 669 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm8929-201ENSMUST00000197781 1132 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms