Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Gm5734-201ENSMUST00000189787 913 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Gm43744-201ENSMUST00000196387 688 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Gm6070-201ENSMUST00000207275 419 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Gm18103-201ENSMUST00000216621 779 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Glycam1-204ENSMUST00000228895 641 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Mir7b-201ENSMUST00000083557 111 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
Ccdc40Q8BI79 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm12939-201ENSMUST00000117303 165 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm13818-201ENSMUST00000119441 511 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm12504-202ENSMUST00000148026 306 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm4152-201ENSMUST00000172675 259 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm21959-201ENSMUST00000178439 452 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm27005-201ENSMUST00000182783 921 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm45473-201ENSMUST00000211452 616 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm18955-201ENSMUST00000223173 649 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc40Q8BI79 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms