Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm29159-201ENSMUST00000187969 379 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm15500-201ENSMUST00000071523 894 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm11908-201ENSMUST00000117755 347 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm7700-201ENSMUST00000120273 970 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm9006-201ENSMUST00000165520 841 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm8039-201ENSMUST00000204758 712 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.93□□□□□ -1.3
Nup98Q6PFD9 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm23211-201ENSMUST00000122717 308 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm13473-201ENSMUST00000119289 367 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm25227-201ENSMUST00000158204 112 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm22993-201ENSMUST00000175423 254 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm44539-201ENSMUST00000206010 238 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AV026068-231ENSMUST00000225862 482 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Nup98Q6PFD9 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms