Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AC158521.1-201ENSMUST00000225295 660 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 AC187103.4-201ENSMUST00000225399 300 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 n-R5s217-201ENSMUST00000083341 116 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm24032-201ENSMUST00000083932 159 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm23516-201ENSMUST00000093728 107 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm15229-201ENSMUST00000146636 1398 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim41Q5NCC3 Gm17101-201ENSMUST00000169520 1588 ntBASIC12.52□□□□□ -0.4
Trim41Q5NCC3 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim41Q5NCC3 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim41Q5NCC3 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim41Q5NCC3 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim41Q5NCC3 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm16274-201ENSMUST00000139251 592 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm22101-201ENSMUST00000157928 103 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm22434-201ENSMUST00000158549 122 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm23025-201ENSMUST00000158769 111 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm20397-201ENSMUST00000174520 362 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm37111-201ENSMUST00000193250 634 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Igkv13-82-201ENSMUST00000200308 346 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm45432-201ENSMUST00000210391 416 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 AC132317.2-201ENSMUST00000227301 519 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm43189-201ENSMUST00000196040 3069 ntBASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trim41Q5NCC3 Gm16436-201ENSMUST00000121510 1607 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 AC115891.1-201ENSMUST00000215798 1755 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm43679-201ENSMUST00000197051 3677 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm24430-201ENSMUST00000104077 104 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Mir290a-201ENSMUST00000104627 83 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Mir466j-201ENSMUST00000116876 122 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm13878-201ENSMUST00000117986 577 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm11889-201ENSMUST00000118402 1079 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm14899-201ENSMUST00000118673 548 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm15081-201ENSMUST00000119794 844 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm13940-201ENSMUST00000121023 301 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm22262-201ENSMUST00000158713 86 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm27942-201ENSMUST00000184669 101 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm28983-201ENSMUST00000186685 614 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm28150-201ENSMUST00000187305 614 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm28377-201ENSMUST00000189695 720 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm2860-201ENSMUST00000199226 707 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm17984-201ENSMUST00000205286 859 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm44754-201ENSMUST00000208155 400 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm45343-201ENSMUST00000210452 828 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 AC166358.9-201ENSMUST00000220653 375 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 AC154380.1-201ENSMUST00000226804 720 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 AC154838.1-201ENSMUST00000228944 911 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm9845-201ENSMUST00000056409 598 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Trim41Q5NCC3 Gm45807-201ENSMUST00000209142 2874 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 AC132336.1-201ENSMUST00000222844 1740 ntBASIC12.51□□□□□ -0.41
Trim41Q5NCC3 CT571245.1-201ENSMUST00000218642 3465 ntBASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim41Q5NCC3 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms