Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm37044-201ENSMUST00000193531 693 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Gm18843-201ENSMUST00000194982 719 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Gm38369-201ENSMUST00000195101 693 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Gm44053-201ENSMUST00000203364 929 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 AL603630.1-201ENSMUST00000214781 147 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Gm8290-201ENSMUST00000218202 477 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 AC126275.1-201ENSMUST00000224881 446 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Nsa2-203ENSMUST00000225410 974 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 BC023105-201ENSMUST00000073997 1227 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Olfr888-201ENSMUST00000075228 945 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Gm24207-201ENSMUST00000082781 108 ntBASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccbe1Q3MI99 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm14445-201ENSMUST00000117051 1484 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm22439-201ENSMUST00000104048 132 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm22671-201ENSMUST00000104420 134 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm24986-201ENSMUST00000104452 132 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm15166-201ENSMUST00000120790 385 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm25164-201ENSMUST00000158908 116 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm29148-201ENSMUST00000188140 336 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm29650-201ENSMUST00000188485 742 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm28384-201ENSMUST00000189079 463 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm36448-201ENSMUST00000199916 438 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm43367-201ENSMUST00000199986 625 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm44892-201ENSMUST00000208595 488 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm19170-201ENSMUST00000212440 1084 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm34424-201ENSMUST00000213400 782 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 AC116589.3-202ENSMUST00000221770 649 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 AC116589.6-201ENSMUST00000222252 649 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 AC154724.1-201ENSMUST00000225782 821 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm10704-201ENSMUST00000098952 730 ntBASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ccbe1Q3MI99 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms