Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm2214-201ENSMUST00000121333 330 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm14038-201ENSMUST00000121500 807 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm13676-201ENSMUST00000122185 591 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm15086-201ENSMUST00000143110 573 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm15646-201ENSMUST00000143317 766 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm17121-201ENSMUST00000170414 847 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm17973-201ENSMUST00000174509 520 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm21965-201ENSMUST00000177770 384 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm20945-201ENSMUST00000178122 1145 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm17222-201ENSMUST00000180135 847 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm5445-201ENSMUST00000180224 480 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm11109-201ENSMUST00000180289 384 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm15100-201ENSMUST00000180357 573 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm28885-201ENSMUST00000185615 563 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm37187-201ENSMUST00000193425 341 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm37469-201ENSMUST00000193728 890 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm33973-201ENSMUST00000195148 534 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm42580-201ENSMUST00000197223 753 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm44111-201ENSMUST00000204649 399 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm20997-201ENSMUST00000205148 231 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm2734-201ENSMUST00000208561 743 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm17875-201ENSMUST00000216005 941 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm46313-201ENSMUST00000220463 547 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 AC140210.1-201ENSMUST00000224961 534 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 AC154506.2-201ENSMUST00000225481 1276 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 AC154640.1-204ENSMUST00000227105 648 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.41□□□□□ -1.54
Trim63Q38HM4 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim63Q38HM4 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm38147-201ENSMUST00000192397 1798 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Mir147-201ENSMUST00000102354 79 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm12683-201ENSMUST00000117528 415 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm8534-201ENSMUST00000118553 766 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm12788-201ENSMUST00000119090 308 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm12499-201ENSMUST00000121961 546 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm10913-201ENSMUST00000133732 463 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm11197-201ENSMUST00000145158 839 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm24444-201ENSMUST00000157244 308 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm22224-201ENSMUST00000157357 93 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm23007-201ENSMUST00000158951 177 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm3326-201ENSMUST00000164656 1043 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm3571-201ENSMUST00000170703 1060 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm17157-201ENSMUST00000172397 348 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Gm21809-201ENSMUST00000178495 468 ntBASIC5.4□□□□□ -1.54
Trim63Q38HM4 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms