Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Gm5185-201ENSMUST00000080271 619 ntBASIC6.46□□□□□ -1.38
SgcbP82349 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SgcbP82349 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.46□□□□□ -1.38
SgcbP82349 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Gm37496-201ENSMUST00000191930 2509 ntBASIC6.46□□□□□ -1.38
SgcbP82349 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SgcbP82349 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SgcbP82349 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.46□□□□□ -1.38
SgcbP82349 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
SgcbP82349 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Gm44950-201ENSMUST00000206403 2296 ntBASIC6.46□□□□□ -1.38
SgcbP82349 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.46□□□□□ -1.38
SgcbP82349 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SgcbP82349 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SgcbP82349 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SgcbP82349 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.45□□□□□ -1.38
SgcbP82349 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm26384-201ENSMUST00000102183 110 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm23527-201ENSMUST00000104570 130 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SgcbP82349 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm14794-201ENSMUST00000118181 192 ntBASIC6.45□□□□□ -1.38
SgcbP82349 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm7973-201ENSMUST00000122107 488 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm25180-201ENSMUST00000157746 115 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.45□□□□□ -1.38
SgcbP82349 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm18604-201ENSMUST00000172535 558 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm24561-201ENSMUST00000175182 95 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Pea15b-201ENSMUST00000182806 387 ntBASIC6.45□□□□□ -1.38
SgcbP82349 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm28802-201ENSMUST00000188624 944 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm7492-201ENSMUST00000201745 725 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SgcbP82349 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm45432-201ENSMUST00000210391 416 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SgcbP82349 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.45□□□□□ -1.38
SgcbP82349 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.45□□□□□ -1.38
SgcbP82349 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.45□□□□□ -1.38
SgcbP82349 Gm5514-201ENSMUST00000060477 306 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm7204-201ENSMUST00000062591 600 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SgcbP82349 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SgcbP82349 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SgcbP82349 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SgcbP82349 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.45□□□□□ -1.38
SgcbP82349 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms