Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm3P62311 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.17□□□□□ -1.58
Lsm3P62311 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm3P62311 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Lsm3P62311 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC5.16□□□□□ -1.58
Lsm3P62311 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm13744-201ENSMUST00000118953 850 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
Lsm3P62311 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.16□□□□□ -1.58
Lsm3P62311 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Mir5107-201ENSMUST00000175586 88 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm1972-201ENSMUST00000181606 964 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm27596-201ENSMUST00000185061 83 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm18875-201ENSMUST00000188563 882 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm5734-201ENSMUST00000189787 913 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm38135-201ENSMUST00000195068 502 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm38360-201ENSMUST00000195130 454 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm43546-201ENSMUST00000196721 943 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm43459-201ENSMUST00000202093 331 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm43040-201ENSMUST00000202399 558 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm42713-201ENSMUST00000202709 945 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm45136-201ENSMUST00000205793 943 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm45870-201ENSMUST00000211269 601 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm45725-201ENSMUST00000212962 337 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.16□□□□□ -1.58
Lsm3P62311 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lsm3P62311 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Snord59a-201ENSMUST00000082844 74 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm24029-201ENSMUST00000083928 143 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Lsm3P62311 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm3P62311 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm3P62311 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.16□□□□□ -1.58
Lsm3P62311 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
Lsm3P62311 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Lsm3P62311 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.15□□□□□ -1.58
Lsm3P62311 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm3P62311 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm3P62311 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm3P62311 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lsm3P62311 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm3P62311 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.15□□□□□ -1.59
Lsm3P62311 Gm13770-201ENSMUST00000117149 305 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 Gm16394-201ENSMUST00000117289 675 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 Gm15048-201ENSMUST00000118201 954 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 Gm14741-201ENSMUST00000120777 1009 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 Gm5166-201ENSMUST00000121332 573 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm3P62311 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.15□□□□□ -1.59
Lsm3P62311 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.15□□□□□ -1.59
Lsm3P62311 Gm22916-201ENSMUST00000157616 119 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 Gm26182-201ENSMUST00000157688 116 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 Gm23115-201ENSMUST00000158480 108 ntBASIC5.15□□□□□ -1.59
Lsm3P62311 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm3P62311 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lsm3P62311 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lsm3P62311 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms