Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tpm1P58771 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tpm1P58771 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Tpm1P58771 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Tpm1P58771 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tpm1P58771 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Tpm1P58771 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.36
Tpm1P58771 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.52□□□□□ -1.36
Tpm1P58771 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Tpm1P58771 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm14294-201ENSMUST00000119749 751 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm16260-201ENSMUST00000155141 304 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 Gm10136-201ENSMUST00000183196 435 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.52□□□□□ -1.37
Tpm1P58771 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm18329-201ENSMUST00000215832 589 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm11360-201ENSMUST00000221898 262 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Tpm1P58771 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tpm1P58771 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.52□□□□□ -1.37
Tpm1P58771 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Tpm1P58771 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tpm1P58771 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Tpm1P58771 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Tpm1P58771 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Tpm1P58771 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Mir688-201ENSMUST00000102055 75 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Tpm1P58771 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.51□□□□□ -1.37
Tpm1P58771 Gm22952-201ENSMUST00000116720 120 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Mir1903-201ENSMUST00000122574 80 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.51□□□□□ -1.37
Tpm1P58771 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.51□□□□□ -1.37
Tpm1P58771 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.51□□□□□ -1.37
Tpm1P58771 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Gm5947-201ENSMUST00000179156 714 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Gm5645-201ENSMUST00000179597 714 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.51□□□□□ -1.37
Tpm1P58771 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.51□□□□□ -1.37
Tpm1P58771 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.51□□□□□ -1.37
Tpm1P58771 Gm44316-201ENSMUST00000199274 97 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Gm24041-201ENSMUST00000083115 156 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.51□□□□□ -1.37
Tpm1P58771 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tpm1P58771 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.51□□□□□ -1.37
Tpm1P58771 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Tpm1P58771 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Tpm1P58771 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Tpm1P58771 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Tpm1P58771 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Tpm1P58771 Gm25916-201ENSMUST00000104263 131 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm23527-201ENSMUST00000104570 130 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Tpm1P58771 Gm7927-201ENSMUST00000118818 880 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms