Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm3266-201ENSMUST00000217832 591 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Shmt1P50431 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Olfr519-201ENSMUST00000084752 960 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Shmt1P50431 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm42942-201ENSMUST00000196086 1328 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Shmt1P50431 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Shmt1P50431 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm11433-201ENSMUST00000118318 228 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm11976-201ENSMUST00000119236 295 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm14098-201ENSMUST00000119295 623 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm5387-201ENSMUST00000119776 857 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.67□□□□□ -1.34
Shmt1P50431 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.67□□□□□ -1.34
Shmt1P50431 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm5947-201ENSMUST00000179156 714 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm5645-201ENSMUST00000179597 714 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-7-201ENSMUST00000180364 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC6.67□□□□□ -1.34
Shmt1P50431 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm37265-201ENSMUST00000191698 885 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm36974-201ENSMUST00000194200 1071 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-6-201ENSMUST00000196127 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-12-201ENSMUST00000197274 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-5-201ENSMUST00000197439 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-10-201ENSMUST00000197745 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-11-201ENSMUST00000197952 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-4-201ENSMUST00000198665 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-9-201ENSMUST00000200087 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Mir669a-8-201ENSMUST00000200268 87 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.67□□□□□ -1.34
Shmt1P50431 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 AC167977.2-201ENSMUST00000225676 682 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm25133-201ENSMUST00000082647 130 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.67□□□□□ -1.34
Shmt1P50431 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Shmt1P50431 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shmt1P50431 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms