Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HttP42859 AC107453.4-201ENSMUST00000227068 1817 ntBASIC6.08□□□□□ -1.44
HttP42859 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HttP42859 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HttP42859 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HttP42859 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.08□□□□□ -1.44
HttP42859 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HttP42859 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HttP42859 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HttP42859 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HttP42859 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HttP42859 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.08□□□□□ -1.44
HttP42859 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HttP42859 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.08□□□□□ -1.44
HttP42859 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HttP42859 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.08□□□□□ -1.44
HttP42859 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.08□□□□□ -1.44
HttP42859 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.08□□□□□ -1.44
HttP42859 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HttP42859 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.08□□□□□ -1.44
HttP42859 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HttP42859 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
HttP42859 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.07□□□□□ -1.44
HttP42859 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HttP42859 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC6.07□□□□□ -1.44
HttP42859 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
HttP42859 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.07□□□□□ -1.44
HttP42859 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC6.07□□□□□ -1.44
HttP42859 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.07□□□□□ -1.44
HttP42859 Gm7045-201ENSMUST00000221466 605 ntBASIC6.07□□□□□ -1.44
HttP42859 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.07□□□□□ -1.44
HttP42859 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HttP42859 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HttP42859 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC6.07□□□□□ -1.44
HttP42859 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Gm37341-201ENSMUST00000194680 371 ntBASIC6.07□□□□□ -1.44
HttP42859 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.07□□□□□ -1.44
HttP42859 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.07□□□□□ -1.44
HttP42859 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.07□□□□□ -1.44
HttP42859 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.07□□□□□ -1.44
HttP42859 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HttP42859 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.06□□□□□ -1.44
HttP42859 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.06□□□□□ -1.44
HttP42859 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm23692-201ENSMUST00000101881 160 ntBASIC6.06□□□□□ -1.44
HttP42859 Gm25179-201ENSMUST00000122632 128 ntBASIC6.06□□□□□ -1.44
HttP42859 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Gm19029-201ENSMUST00000189923 564 ntBASIC6.06□□□□□ -1.44
HttP42859 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.06□□□□□ -1.44
HttP42859 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.06□□□□□ -1.44
HttP42859 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.06□□□□□ -1.44
HttP42859 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
HttP42859 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.06□□□□□ -1.44
HttP42859 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms