Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Cmah-208ENSMUST00000224819 9482 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm13137-201ENSMUST00000118035 345 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm28429-201ENSMUST00000188521 363 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm43222-201ENSMUST00000199013 603 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm10064-201ENSMUST00000071235 399 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.25□□□□□ -1.41
Cxcl12P40224 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cxcl12P40224 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cxcl12P40224 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm42679-201ENSMUST00000197086 2906 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm12874-201ENSMUST00000117190 913 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm20480-201ENSMUST00000173953 250 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Mir6539-201ENSMUST00000183732 110 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Mir8097-201ENSMUST00000185150 119 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm18969-201ENSMUST00000189423 730 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm42522-201ENSMUST00000196071 255 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm43743-202ENSMUST00000198353 491 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm9332-201ENSMUST00000198431 730 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm32158-201ENSMUST00000200135 404 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm45249-201ENSMUST00000211021 348 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.24□□□□□ -1.41
Cxcl12P40224 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms