Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm42663-201ENSMUST00000199883 351 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm43531-201ENSMUST00000200676 1114 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm8999-201ENSMUST00000204951 969 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 AC102352.1-201ENSMUST00000224187 582 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm5436-201ENSMUST00000058103 643 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm44255-201ENSMUST00000203456 2053 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm15425-201ENSMUST00000119013 2711 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm45172-201ENSMUST00000206054 1301 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 AC159006.2-201ENSMUST00000228734 4144 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC8.11□□□□□ -1.11
Col18a1P39061 Mir669p-2-201ENSMUST00000103868 87 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Mir669p-1-201ENSMUST00000103884 87 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Col18a1P39061 Gm12584-201ENSMUST00000117109 1105 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm13566-201ENSMUST00000117428 1142 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm7927-201ENSMUST00000118818 880 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm15660-201ENSMUST00000118997 478 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm13473-201ENSMUST00000119289 367 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC8.11□□□□□ -1.11
Col18a1P39061 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC8.11□□□□□ -1.11
Col18a1P39061 Gm17043-201ENSMUST00000164621 1283 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Mir6943-201ENSMUST00000185186 66 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm5268-201ENSMUST00000189212 940 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm43078-201ENSMUST00000197222 168 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm31211-201ENSMUST00000199170 253 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm43894-201ENSMUST00000203274 688 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Gm5885-202ENSMUST00000203357 528 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Col18a1P39061 Gm19786-201ENSMUST00000222589 580 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 AC154323.1-201ENSMUST00000228329 1231 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col18a1P39061 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col18a1P39061 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col18a1P39061 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col18a1P39061 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.11□□□□□ -1.11
Col18a1P39061 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 AC122305.1-201ENSMUST00000214803 3921 ntBASIC8.11□□□□□ -1.11
Col18a1P39061 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col18a1P39061 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Grik1-209ENSMUST00000227986 2942 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm22499-201ENSMUST00000104501 135 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm15103-201ENSMUST00000119893 871 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm22038-201ENSMUST00000157277 242 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm27820-201ENSMUST00000183628 175 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm28437-201ENSMUST00000190277 783 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 AL589696.1-201ENSMUST00000225711 330 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 AC096628.1-201ENSMUST00000226060 641 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 n-R5s180-201ENSMUST00000082770 106 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm24029-201ENSMUST00000083928 143 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm43425-201ENSMUST00000201793 3291 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms