Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Snora35-201ENSMUST00000104579 128 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm14755-201ENSMUST00000118037 384 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm11902-201ENSMUST00000118849 270 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm12807-201ENSMUST00000121546 962 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm22116-201ENSMUST00000158791 141 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm26595-201ENSMUST00000181585 484 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm27853-201ENSMUST00000184176 250 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Mir7072-201ENSMUST00000184542 60 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm28527-201ENSMUST00000185210 297 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm21728-201ENSMUST00000188442 695 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm21889-201ENSMUST00000188487 695 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm20932-201ENSMUST00000189115 694 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm21920-201ENSMUST00000190042 695 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm3351-201ENSMUST00000193454 505 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm8861-201ENSMUST00000196346 832 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm2142-201ENSMUST00000197899 589 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 BC049739-201ENSMUST00000202626 660 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm45485-201ENSMUST00000211229 357 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hoxc11P31313 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.14□□□□□ -1.43
Hoxc11P31313 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxc11P31313 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxc11P31313 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm22103-201ENSMUST00000116733 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm26475-201ENSMUST00000116769 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm23620-201ENSMUST00000116812 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm25042-201ENSMUST00000116856 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm25540-201ENSMUST00000116880 121 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm11821-201ENSMUST00000117335 979 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm4914-201ENSMUST00000119757 459 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm12229-201ENSMUST00000120487 468 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm13578-201ENSMUST00000120849 590 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm14840-201ENSMUST00000122135 594 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm15300-201ENSMUST00000122324 279 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm26410-201ENSMUST00000157670 261 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm23896-201ENSMUST00000158109 130 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm25487-201ENSMUST00000158725 125 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm17223-201ENSMUST00000171413 481 ntBASIC6.13□□□□□ -1.43
Hoxc11P31313 Gm22548-201ENSMUST00000174899 78 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms