Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col2a1P28481 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm14220-201ENSMUST00000118114 449 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Gm3943-201ENSMUST00000118606 718 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm24692-201ENSMUST00000157761 146 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Gm3008-201ENSMUST00000160566 571 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Gm9006-201ENSMUST00000165520 841 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Mir6903-201ENSMUST00000183597 88 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm8920-201ENSMUST00000196153 924 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Gm7733-201ENSMUST00000199038 919 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Gm43973-201ENSMUST00000203562 210 ntBASIC6.75□□□□□ -1.33
Col2a1P28481 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col2a1P28481 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col2a1P28481 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col2a1P28481 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Col2a1P28481 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col2a1P28481 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col2a1P28481 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.74□□□□□ -1.33
Col2a1P28481 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm25919-201ENSMUST00000104271 132 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm11481-201ENSMUST00000120069 255 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Gm25489-201ENSMUST00000158727 141 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm4617-201ENSMUST00000178993 331 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm18702-201ENSMUST00000196923 588 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Gm5735-201ENSMUST00000207053 167 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col2a1P28481 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Col2a1P28481 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Col2a1P28481 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col2a1P28481 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col2a1P28481 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.74□□□□□ -1.33
Col2a1P28481 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.73□□□□□ -1.33
Col2a1P28481 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm26172-201ENSMUST00000158421 134 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms