Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Clk1P22518 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clk1P22518 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clk1P22518 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.81□□□□□ -1.48
Clk1P22518 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clk1P22518 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.81□□□□□ -1.48
Clk1P22518 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clk1P22518 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.81□□□□□ -1.48
Clk1P22518 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm23979-201ENSMUST00000104071 128 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.8□□□□□ -1.48
Clk1P22518 Gm14513-201ENSMUST00000117403 123 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm14755-201ENSMUST00000118037 384 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm14520-201ENSMUST00000119258 387 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.8□□□□□ -1.48
Clk1P22518 Mir6367-201ENSMUST00000183385 102 ntBASIC5.8□□□□□ -1.48
Clk1P22518 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.8□□□□□ -1.48
Clk1P22518 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm37682-201ENSMUST00000191776 522 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm43596-201ENSMUST00000202818 884 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.8□□□□□ -1.48
Clk1P22518 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Gm2225-201ENSMUST00000209570 377 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.8□□□□□ -1.48
Clk1P22518 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.8□□□□□ -1.48
Clk1P22518 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clk1P22518 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.8□□□□□ -1.48
Clk1P22518 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clk1P22518 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.8□□□□□ -1.48
Clk1P22518 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clk1P22518 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.79□□□□□ -1.48
Clk1P22518 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.79□□□□□ -1.48
Clk1P22518 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.79□□□□□ -1.48
Clk1P22518 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
Clk1P22518 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.79□□□□□ -1.48
Clk1P22518 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.79□□□□□ -1.48
Clk1P22518 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clk1P22518 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.79□□□□□ -1.48
Clk1P22518 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.79□□□□□ -1.48
Clk1P22518 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.79□□□□□ -1.48
Clk1P22518 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.79□□□□□ -1.48
Clk1P22518 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clk1P22518 Gm22701-201ENSMUST00000175371 291 ntBASIC5.79□□□□□ -1.48
Clk1P22518 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.79□□□□□ -1.48
Clk1P22518 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clk1P22518 Gm27853-201ENSMUST00000184176 250 ntBASIC5.79□□□□□ -1.48
Clk1P22518 Gm29464-201ENSMUST00000187692 513 ntBASIC5.79□□□□□ -1.48
Clk1P22518 Gm29148-201ENSMUST00000188140 336 ntBASIC5.79□□□□□ -1.48
Clk1P22518 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms