Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Snora35-201ENSMUST00000104579 128 ntBASIC5.32□□□□□ -1.56
P20040 Gm13193-201ENSMUST00000117275 225 ntBASIC5.32□□□□□ -1.56
P20040 Gm12985-201ENSMUST00000118376 183 ntBASIC5.32□□□□□ -1.56
P20040 Gm9005-201ENSMUST00000119908 607 ntBASIC5.32□□□□□ -1.56
P20040 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Gm25117-201ENSMUST00000157194 144 ntBASIC5.32□□□□□ -1.56
P20040 Gm10177-201ENSMUST00000160052 444 ntBASIC5.32□□□□□ -1.56
P20040 Gm8183-201ENSMUST00000183134 980 ntBASIC5.32□□□□□ -1.56
P20040 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.32□□□□□ -1.56
P20040 Gm29489-201ENSMUST00000188934 324 ntBASIC5.32□□□□□ -1.56
P20040 Gm29592-201ENSMUST00000189434 370 ntBASIC5.32□□□□□ -1.56
P20040 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
P20040 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.32□□□□□ -1.56
P20040 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.32□□□□□ -1.56
P20040 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.32□□□□□ -1.56
P20040 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Gm3266-201ENSMUST00000217832 591 ntBASIC5.32□□□□□ -1.56
P20040 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
P20040 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
P20040 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
P20040 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
P20040 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
P20040 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
P20040 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.32□□□□□ -1.56
P20040 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.32□□□□□ -1.56
P20040 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.32□□□□□ -1.56
P20040 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.32□□□□□ -1.56
P20040 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
P20040 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
P20040 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.31□□□□□ -1.56
P20040 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.31□□□□□ -1.56
P20040 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.31□□□□□ -1.56
P20040 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
P20040 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.31□□□□□ -1.56
P20040 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.31□□□□□ -1.56
P20040 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.31□□□□□ -1.56
P20040 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.31□□□□□ -1.56
P20040 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
P20040 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.31□□□□□ -1.56
P20040 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
P20040 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.31□□□□□ -1.56
P20040 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm27005-201ENSMUST00000182783 921 ntBASIC5.31□□□□□ -1.56
P20040 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
P20040 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.31□□□□□ -1.56
P20040 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.31□□□□□ -1.56
P20040 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.31□□□□□ -1.56
P20040 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.31□□□□□ -1.56
P20040 Gm2602-201ENSMUST00000202112 571 ntBASIC5.31□□□□□ -1.56
P20040 Gm44075-201ENSMUST00000204208 216 ntBASIC5.31□□□□□ -1.56
P20040 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.31□□□□□ -1.56
P20040 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 Gm45473-201ENSMUST00000211452 616 ntBASIC5.31□□□□□ -1.56
P20040 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.31□□□□□ -1.56
P20040 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.31□□□□□ -1.56
P20040 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.31□□□□□ -1.56
P20040 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.31□□□□□ -1.56
P20040 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
P20040 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.31□□□□□ -1.56
P20040 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.31□□□□□ -1.56
P20040 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
P20040 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
P20040 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
P20040 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms