Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm17048-201ENSMUST00000179266 847 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm1972-201ENSMUST00000181606 964 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm26970-201ENSMUST00000182990 964 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm29356-201ENSMUST00000186935 373 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm37506-201ENSMUST00000192008 143 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm8869-201ENSMUST00000195222 947 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm43906-201ENSMUST00000203194 906 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm18484-201ENSMUST00000204389 991 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm18907-201ENSMUST00000209719 932 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC4.81□□□□□ -1.64
Sdc1P18828 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 AC161252.1-201ENSMUST00000225536 467 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 AC129017.2-201ENSMUST00000226118 1284 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sdc1P18828 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sdc1P18828 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm44750-201ENSMUST00000206185 2223 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Sdc1P18828 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Sdc1P18828 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sdc1P18828 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm13141-201ENSMUST00000117417 456 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm8501-201ENSMUST00000117684 432 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm11920-201ENSMUST00000118491 563 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm14645-201ENSMUST00000118597 417 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm11484-201ENSMUST00000119808 338 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm12123-201ENSMUST00000120348 472 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm22728-201ENSMUST00000158087 129 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm7244-201ENSMUST00000164658 455 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm8282-201ENSMUST00000187559 483 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm29464-201ENSMUST00000187692 513 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm29664-201ENSMUST00000191125 463 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm37700-201ENSMUST00000192617 965 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm37716-201ENSMUST00000193553 947 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm7512-201ENSMUST00000195217 1170 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm7626-201ENSMUST00000195801 353 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm42452-201ENSMUST00000199749 617 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 AC099934.1-201ENSMUST00000200493 79 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm43867-201ENSMUST00000203860 525 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm45082-201ENSMUST00000206082 601 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Diaph3-204ENSMUST00000226254 682 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Ermard-209ENSMUST00000226561 1019 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 AC154692.1-202ENSMUST00000226632 1231 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm18879-201ENSMUST00000221187 1537 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC4.8□□□□□ -1.64
Sdc1P18828 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms