Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC7□□□□□ -1.29
Col1a1P11087 Gm37436-201ENSMUST00000193842 1085 ntBASIC7□□□□□ -1.29
Col1a1P11087 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7□□□□□ -1.29
Col1a1P11087 Gm19065-202ENSMUST00000203910 1165 ntBASIC7□□□□□ -1.29
Col1a1P11087 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Gm18587-201ENSMUST00000213736 841 ntBASIC7□□□□□ -1.29
Col1a1P11087 Clec2j-201ENSMUST00000032517 515 ntBASIC7□□□□□ -1.29
Col1a1P11087 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC7□□□□□ -1.29
Col1a1P11087 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Gm42607-201ENSMUST00000200221 3393 ntBASIC7□□□□□ -1.29
Col1a1P11087 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7□□□□□ -1.29
Col1a1P11087 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col1a1P11087 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7□□□□□ -1.29
Col1a1P11087 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Gm14601-201ENSMUST00000120892 236 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Gm2429-201ENSMUST00000194635 586 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Gm43743-202ENSMUST00000198353 491 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm44132-201ENSMUST00000205142 151 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col1a1P11087 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col1a1P11087 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.99□□□□□ -1.29
Col1a1P11087 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col1a1P11087 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm9429-201ENSMUST00000117804 868 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Gm13738-201ENSMUST00000122437 469 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.98□□□□□ -1.29
Col1a1P11087 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm44456-201ENSMUST00000196554 89 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Gm6543-201ENSMUST00000197353 808 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.98□□□□□ -1.29
Col1a1P11087 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms