Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm17044-201ENSMUST00000168549 828 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm27849-201ENSMUST00000183673 125 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm8419-201ENSMUST00000189886 412 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm44382-201ENSMUST00000198683 122 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm31211-201ENSMUST00000199170 253 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm4742-201ENSMUST00000200261 771 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxa9P09631 Gm9237-201ENSMUST00000221499 548 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxa9P09631 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.16□□□□□ -1.42
Hoxa9P09631 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxa9P09631 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxa9P09631 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Hoxa9P09631 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.16□□□□□ -1.42
Hoxa9P09631 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Hoxa9P09631 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxa9P09631 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxa9P09631 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm6884-201ENSMUST00000119318 615 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm8761-201ENSMUST00000121507 955 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.15□□□□□ -1.42
Hoxa9P09631 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm25445-201ENSMUST00000158996 299 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Mir3572-201ENSMUST00000175549 86 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Mir7685-201ENSMUST00000183555 62 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm5306-201ENSMUST00000203325 757 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm44768-201ENSMUST00000205719 393 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm44837-201ENSMUST00000206863 717 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxa9P09631 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxa9P09631 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxa9P09631 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxa9P09631 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 Gm18405-201ENSMUST00000220743 511 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.15□□□□□ -1.42
Hoxa9P09631 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxa9P09631 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxa9P09631 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxa9P09631 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxa9P09631 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.15□□□□□ -1.43
Hoxa9P09631 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Hoxa9P09631 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxa9P09631 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxa9P09631 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxa9P09631 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.43
Hoxa9P09631 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxa9P09631 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxa9P09631 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Hoxa9P09631 Gm26067-201ENSMUST00000103789 110 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 Gm25415-201ENSMUST00000104220 132 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxa9P09631 Gm13193-201ENSMUST00000117275 225 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 Gm5073-201ENSMUST00000118222 820 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 Gm13740-201ENSMUST00000120590 310 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.14□□□□□ -1.43
Hoxa9P09631 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxa9P09631 Gm24741-201ENSMUST00000158857 106 ntBASIC6.14□□□□□ -1.43
Hoxa9P09631 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms