Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm42639-201ENSMUST00000197061 1871 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 CT571245.1-201ENSMUST00000218642 3465 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm10936-201ENSMUST00000105264 252 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm11649-201ENSMUST00000118214 375 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm9059-201ENSMUST00000118319 183 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm12219-201ENSMUST00000119198 443 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm15572-201ENSMUST00000119248 593 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm11352-201ENSMUST00000119264 517 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm13466-201ENSMUST00000121515 999 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm14162-201ENSMUST00000121985 601 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm23222-201ENSMUST00000158117 76 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm18709-201ENSMUST00000180564 489 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm27006-201ENSMUST00000182218 943 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm18667-201ENSMUST00000186523 484 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm9451-201ENSMUST00000188491 604 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm21088-201ENSMUST00000190875 316 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm20940-201ENSMUST00000197308 360 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm45508-201ENSMUST00000209298 299 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm2628-201ENSMUST00000218019 426 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm8681-201ENSMUST00000219115 618 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 AC125543.2-201ENSMUST00000222114 105 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 CT030170.7-201ENSMUST00000223372 103 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 AC115878.1-201ENSMUST00000227247 334 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm5582-201ENSMUST00000075251 522 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm24144-201ENSMUST00000082632 111 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 AC101875.1-201ENSMUST00000222666 2223 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm8204-201ENSMUST00000185696 2144 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm2762-207ENSMUST00000202739 2665 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.1□□□□□ -1.43
Hoxd3P09027 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Hoxd3P09027 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.1□□□□□ -1.43
Hoxd3P09027 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd3P09027 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms