Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mir5617-201ENSMUST00000176786 57 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm28973-201ENSMUST00000189310 613 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm35013-201ENSMUST00000197218 832 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm43467-201ENSMUST00000197441 437 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm5886-202ENSMUST00000203957 522 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm5314-201ENSMUST00000204852 466 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm8607-201ENSMUST00000221864 431 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm24695-201ENSMUST00000083877 83 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm43328-201ENSMUST00000198544 1434 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm37953-201ENSMUST00000195293 1884 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm8501-201ENSMUST00000117684 432 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm7927-201ENSMUST00000118818 880 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm11227-201ENSMUST00000119774 471 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC4.78□□□□□ -1.64
Hmgb3O54879 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm2367-201ENSMUST00000192374 472 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Ighv1-10-201ENSMUST00000194372 355 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm18290-201ENSMUST00000202900 844 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm18405-201ENSMUST00000220743 511 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm23686-201ENSMUST00000083241 164 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 AW046200-203ENSMUST00000211787 2479 ntBASIC4.78□□□□□ -1.64
Hmgb3O54879 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgb3O54879 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgb3O54879 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm13732-201ENSMUST00000117753 535 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm15715-201ENSMUST00000118032 283 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm12174-201ENSMUST00000119853 813 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms