Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm26057-201ENSMUST00000178099 165 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm27960-201ENSMUST00000183445 184 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm37758-201ENSMUST00000194275 629 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm43561-201ENSMUST00000199866 448 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.07□□□□□ -1.44
Srp54bE9PXC0 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Srp54bE9PXC0 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm13193-201ENSMUST00000117275 225 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm11976-201ENSMUST00000119236 295 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm22210-201ENSMUST00000158101 144 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm27854-201ENSMUST00000175578 244 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm43382-201ENSMUST00000198954 838 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm19182-201ENSMUST00000207139 577 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm45514-201ENSMUST00000211531 689 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Srp54bE9PXC0 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Robo2-210ENSMUST00000226478 8059 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Mir678-201ENSMUST00000102114 84 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm14115-201ENSMUST00000119242 482 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm4853-201ENSMUST00000119359 394 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm7189-201ENSMUST00000119811 429 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm13121-201ENSMUST00000120637 632 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm22276-201ENSMUST00000122469 129 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm22235-201ENSMUST00000157085 110 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Snora47-201ENSMUST00000157483 138 ntBASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Srp54bE9PXC0 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms