Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm10936-201ENSMUST00000105264 252 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm12175-201ENSMUST00000122081 345 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm17217-201ENSMUST00000166613 469 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm19840-201ENSMUST00000169624 882 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm27972-201ENSMUST00000184720 137 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm5853-201ENSMUST00000197183 632 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm18012-201ENSMUST00000204558 773 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm44982-201ENSMUST00000208795 471 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm10794-201ENSMUST00000099624 207 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.46□□□□□ -1.38
Clip3B9EHT4 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clip3B9EHT4 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.46□□□□□ -1.38
Clip3B9EHT4 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clip3B9EHT4 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clip3B9EHT4 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm25313-201ENSMUST00000101817 116 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm23768-201ENSMUST00000104440 131 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm24473-201ENSMUST00000104483 131 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm12442-201ENSMUST00000118372 338 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm7494-201ENSMUST00000121248 441 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm15529-201ENSMUST00000121833 994 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm12778-201ENSMUST00000122341 333 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm22214-201ENSMUST00000157563 172 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm4202-201ENSMUST00000169025 733 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm23287-201ENSMUST00000179427 116 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm23143-201ENSMUST00000180137 116 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm9274-201ENSMUST00000182505 984 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm21392-201ENSMUST00000182950 972 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm7452-201ENSMUST00000200764 788 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm17834-201ENSMUST00000204322 891 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm9367-201ENSMUST00000205703 546 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.45□□□□□ -1.38
Clip3B9EHT4 Gm17911-201ENSMUST00000210806 877 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 AC113305.1-201ENSMUST00000214664 724 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.45□□□□□ -1.38
Clip3B9EHT4 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms