Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm15560-201ENSMUST00000117107 643 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm12303-201ENSMUST00000119506 673 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm11925-201ENSMUST00000121375 535 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm11990-201ENSMUST00000121505 897 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm24692-201ENSMUST00000157761 146 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm18427-201ENSMUST00000195422 515 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm44053-201ENSMUST00000203364 929 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm43973-201ENSMUST00000203562 210 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 Gm4548-201ENSMUST00000208487 509 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.15□□□□□ -1.42
Col4a6B1AVK5 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col4a6B1AVK5 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm22778-201ENSMUST00000104090 128 ntBASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28604-201ENSMUST00000186629 484 ntBASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28566-201ENSMUST00000186714 484 ntBASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28194-201ENSMUST00000187412 484 ntBASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm5334-201ENSMUST00000187472 720 ntBASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28886-202ENSMUST00000187889 484 ntBASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a6B1AVK5 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms