Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm15500-201ENSMUST00000071523 894 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm11987-201ENSMUST00000118524 381 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm26372-201ENSMUST00000157831 236 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm13593-201ENSMUST00000121329 692 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm23539-201ENSMUST00000157537 224 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm27006-201ENSMUST00000182218 943 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm44108-201ENSMUST00000203525 422 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn1aA2APX8 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm5073-201ENSMUST00000118222 820 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm11833-201ENSMUST00000118393 853 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm11737-201ENSMUST00000118713 468 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm12293-201ENSMUST00000121898 590 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm22867-201ENSMUST00000157499 109 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.16□□□□□ -1.42
Scn1aA2APX8 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.16□□□□□ -1.42
Scn1aA2APX8 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Scn1aA2APX8 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm14106-201ENSMUST00000119382 438 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm24767-201ENSMUST00000158509 95 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm28640-201ENSMUST00000190918 550 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Gm7042-201ENSMUST00000223027 384 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.16□□□□□ -1.42
Scn1aA2APX8 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms