Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mir1897-202ENSMUST00000198006 79 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm43276-201ENSMUST00000199712 364 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm44225-201ENSMUST00000203582 186 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm45226-201ENSMUST00000206602 288 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm45034-201ENSMUST00000206831 482 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm29920-201ENSMUST00000206876 754 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm44754-201ENSMUST00000208155 400 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm45900-201ENSMUST00000211879 409 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
Trim39Q9ESN2 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm22426-201ENSMUST00000103811 96 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm26014-201ENSMUST00000104405 132 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm12075-201ENSMUST00000117426 397 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm11859-201ENSMUST00000118099 455 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm14794-201ENSMUST00000118181 192 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm14645-201ENSMUST00000118597 417 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm12358-201ENSMUST00000121842 520 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm22841-201ENSMUST00000158443 62 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm23187-201ENSMUST00000175746 86 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm22252-201ENSMUST00000179316 79 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm29335-201ENSMUST00000188361 459 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm36986-201ENSMUST00000195320 353 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm18340-201ENSMUST00000196342 609 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm43655-201ENSMUST00000197367 222 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 AC137678.1-201ENSMUST00000198370 118 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm5723-201ENSMUST00000203096 432 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm44538-201ENSMUST00000205615 348 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm45474-201ENSMUST00000209471 408 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm45689-201ENSMUST00000210522 133 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 AC109212.1-201ENSMUST00000215561 427 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm20302-201ENSMUST00000080671 275 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm23975-201ENSMUST00000082685 106 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms