Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm23294-201ENSMUST00000104150 164 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm16007-201ENSMUST00000117837 286 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm12369-201ENSMUST00000121343 942 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm14349-201ENSMUST00000137155 902 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm16269-201ENSMUST00000160532 409 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Mir7212-201ENSMUST00000184098 61 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm18405-201ENSMUST00000220743 511 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.84□□□□□ -1.47
Lima1Q9ERG0 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lima1Q9ERG0 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm13768-201ENSMUST00000116469 929 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm13811-201ENSMUST00000117800 256 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm15765-201ENSMUST00000118407 910 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm15801-201ENSMUST00000120920 522 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm12322-201ENSMUST00000121605 389 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Mir1960-201ENSMUST00000157488 78 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm8783-201ENSMUST00000159764 522 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm5947-201ENSMUST00000179156 714 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm5645-201ENSMUST00000179597 714 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm9127-201ENSMUST00000188041 985 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm37265-201ENSMUST00000191698 885 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm38237-201ENSMUST00000193366 376 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm37358-201ENSMUST00000195492 479 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm4332-201ENSMUST00000196114 346 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 BC049739-201ENSMUST00000202626 660 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm5582-201ENSMUST00000075251 522 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.83□□□□□ -1.48
Lima1Q9ERG0 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms