Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3a3Q9D554 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3a3Q9D554 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3a3Q9D554 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3a3Q9D554 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.05□□□□□ -1.44
Sf3a3Q9D554 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3a3Q9D554 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sf3a3Q9D554 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.05□□□□□ -1.44
Sf3a3Q9D554 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm25415-201ENSMUST00000104220 132 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm24888-201ENSMUST00000104387 130 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm14614-201ENSMUST00000119873 384 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm24545-201ENSMUST00000158651 85 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm5430-201ENSMUST00000182525 915 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm27360-201ENSMUST00000183487 80 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm43561-201ENSMUST00000199866 448 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm29778-201ENSMUST00000201667 466 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm6590-201ENSMUST00000203343 687 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm44075-201ENSMUST00000204208 216 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm45042-201ENSMUST00000207377 211 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm4270-201ENSMUST00000209666 406 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm6195-201ENSMUST00000063059 357 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 AW046200-203ENSMUST00000211787 2479 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Sf3a3Q9D554 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm23894-201ENSMUST00000158107 313 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm4845-201ENSMUST00000179202 562 ntBASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sf3a3Q9D554 Gm18709-201ENSMUST00000180564 489 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms