Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 AC117202.3-201ENSMUST00000228532 310 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Mir365-2-201ENSMUST00000083555 112 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm25546-201ENSMUST00000103977 132 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm26419-201ENSMUST00000104272 133 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm25724-201ENSMUST00000104531 117 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm15152-201ENSMUST00000121540 394 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Klra11-ps-201ENSMUST00000122033 810 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Mir1907-201ENSMUST00000122509 90 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm24198-201ENSMUST00000157812 108 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm26371-201ENSMUST00000157829 104 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm7651-201ENSMUST00000173398 901 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm23945-201ENSMUST00000179609 92 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Mir6241-201ENSMUST00000184225 103 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm18875-201ENSMUST00000188563 882 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm36965-201ENSMUST00000193797 394 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm9236-201ENSMUST00000196892 587 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm19596-201ENSMUST00000203685 739 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm45608-201ENSMUST00000210948 389 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm9604-201ENSMUST00000211175 433 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AC112142.1-206ENSMUST00000228136 982 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AC152394.2-202ENSMUST00000228503 1064 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm24268-201ENSMUST00000082990 110 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim11Q99PQ2 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm38374-201ENSMUST00000194417 2033 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Trim11Q99PQ2 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 244.5 ms