Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm24781-201ENSMUST00000157636 117 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Mir5128-201ENSMUST00000175217 84 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm2539-203ENSMUST00000181352 746 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Mir6241-201ENSMUST00000184225 103 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm27185-201ENSMUST00000184296 247 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm28917-201ENSMUST00000187294 237 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm37700-201ENSMUST00000192617 965 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm19231-201ENSMUST00000193212 830 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm2142-201ENSMUST00000197899 589 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm43203-201ENSMUST00000200130 558 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm44615-201ENSMUST00000206548 358 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm44892-201ENSMUST00000208595 488 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm19174-201ENSMUST00000216944 956 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm8275-201ENSMUST00000219732 424 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm18618-201ENSMUST00000222211 473 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim8Q99PJ2 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm10241-201ENSMUST00000117664 286 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm14943-201ENSMUST00000118056 546 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm12447-201ENSMUST00000119110 470 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm7212-201ENSMUST00000120817 348 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm7599-201ENSMUST00000121453 796 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm14038-201ENSMUST00000121500 807 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm24735-201ENSMUST00000158859 118 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm9672-201ENSMUST00000166437 425 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm18415-201ENSMUST00000177464 647 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm27014-201ENSMUST00000182658 937 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm28437-201ENSMUST00000190277 783 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm28466-201ENSMUST00000190678 659 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm35323-201ENSMUST00000191836 499 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim8Q99PJ2 Gm9023-201ENSMUST00000198408 1038 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms