Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Mir188-201ENSMUST00000083464 68 ntBASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Mir133b-201ENSMUST00000083546 119 ntBASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cstf1Q99LC2 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm8545-201ENSMUST00000120692 801 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm26023-201ENSMUST00000122722 313 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm23149-201ENSMUST00000158837 230 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm16269-201ENSMUST00000160532 409 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm28665-201ENSMUST00000189269 670 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm5244-202ENSMUST00000189517 743 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm28640-201ENSMUST00000190918 550 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm37265-201ENSMUST00000191698 885 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm5830-201ENSMUST00000049117 443 ntBASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cstf1Q99LC2 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.15□□□□□ -1.43
Cstf1Q99LC2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Lipe-203ENSMUST00000105177 1251 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm22676-201ENSMUST00000116972 129 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm8692-201ENSMUST00000118102 438 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm14836-201ENSMUST00000118567 471 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm14294-201ENSMUST00000119749 751 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm14300-201ENSMUST00000120800 946 ntBASIC6.14□□□□□ -1.43
Cstf1Q99LC2 Gm13533-201ENSMUST00000121104 177 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms