Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm43085-201ENSMUST00000202859 3132 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm14729-201ENSMUST00000118373 689 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm12104-201ENSMUST00000120359 979 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm24286-201ENSMUST00000157632 128 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm27782-201ENSMUST00000185059 199 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Ighv8-15-201ENSMUST00000197770 294 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm42646-201ENSMUST00000202233 914 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 AC154361.1-201ENSMUST00000225694 745 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm37180-201ENSMUST00000195335 2819 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc9Q8VC31 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm43462-201ENSMUST00000200265 3648 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm24173-201ENSMUST00000104130 128 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm13690-201ENSMUST00000118989 285 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm14587-201ENSMUST00000121714 658 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm24422-201ENSMUST00000157800 119 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm16113-201ENSMUST00000159629 372 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm21959-201ENSMUST00000178439 452 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm27014-201ENSMUST00000182658 937 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm29156-201ENSMUST00000187764 499 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm37383-201ENSMUST00000191750 745 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm37503-201ENSMUST00000192088 319 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm37629-201ENSMUST00000193635 1050 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm19104-201ENSMUST00000198392 679 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 AC154851.1-201ENSMUST00000221591 655 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 AC140209.1-201ENSMUST00000227875 284 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm42600-201ENSMUST00000202081 3588 ntBASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc9Q8VC31 Gm9700-201ENSMUST00000193786 1617 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms