Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm6982-201ENSMUST00000118752 1560 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm25647-201ENSMUST00000101832 78 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm25823-201ENSMUST00000101995 78 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm11796-201ENSMUST00000120208 972 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm12229-201ENSMUST00000120487 468 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm24532-201ENSMUST00000157951 286 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm26381-201ENSMUST00000174895 92 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm24220-201ENSMUST00000177753 79 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm25988-201ENSMUST00000177759 79 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm23471-201ENSMUST00000177886 79 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm26488-201ENSMUST00000178225 79 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm23449-201ENSMUST00000179208 79 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm25221-201ENSMUST00000180051 79 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm27970-201ENSMUST00000184854 407 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm31123-201ENSMUST00000192094 666 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm43459-201ENSMUST00000202093 331 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm18838-201ENSMUST00000204855 886 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm18877-201ENSMUST00000207706 539 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm4548-201ENSMUST00000208487 509 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm44892-201ENSMUST00000208595 488 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm7499-201ENSMUST00000210423 813 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC156795.1-201ENSMUST00000214655 414 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC122937.1-201ENSMUST00000226405 793 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm24405-201ENSMUST00000083033 167 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm22578-201ENSMUST00000083730 107 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Mir463-201ENSMUST00000093570 75 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.17□□□□□ -1.42
Clrn1Q8K445 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Clrn1Q8K445 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.16□□□□□ -1.42
Clrn1Q8K445 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clrn1Q8K445 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms