Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm14870-201ENSMUST00000118414 156 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm14836-201ENSMUST00000118567 471 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm15621-201ENSMUST00000119162 364 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm14038-201ENSMUST00000121500 807 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm12438-201ENSMUST00000122034 336 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm24383-201ENSMUST00000122691 333 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm28507-201ENSMUST00000189737 703 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm37135-201ENSMUST00000192652 534 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm43765-201ENSMUST00000196303 893 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm44361-201ENSMUST00000197960 94 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm42646-201ENSMUST00000202233 914 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm44585-201ENSMUST00000207150 607 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm46364-201ENSMUST00000218548 319 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.45□□□□□ -1.38
CopaQ8CIE6 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CopaQ8CIE6 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm25346-201ENSMUST00000104509 128 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm22953-201ENSMUST00000116724 101 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm11256-201ENSMUST00000118109 829 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm14930-201ENSMUST00000118864 652 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm22235-201ENSMUST00000157085 110 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm26162-201ENSMUST00000157793 132 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm24111-201ENSMUST00000175491 97 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm37072-201ENSMUST00000194570 837 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm44265-201ENSMUST00000203631 465 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm4083-201ENSMUST00000207158 451 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm44656-201ENSMUST00000208428 490 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm17997-201ENSMUST00000211801 840 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm18601-201ENSMUST00000220831 634 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm11360-201ENSMUST00000221898 262 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Cma2-202ENSMUST00000228263 857 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Zfp850-201ENSMUST00000099111 941 ntBASIC6.44□□□□□ -1.38
CopaQ8CIE6 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
CopaQ8CIE6 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms