Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm37897-201ENSMUST00000192613 3561 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm24434-201ENSMUST00000104081 132 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm12654-201ENSMUST00000120387 587 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm12307-201ENSMUST00000120581 590 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm12890-201ENSMUST00000120885 373 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm13998-201ENSMUST00000120952 335 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm15300-201ENSMUST00000122324 279 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm23441-201ENSMUST00000157268 127 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm20549-201ENSMUST00000174804 429 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm20620-201ENSMUST00000177528 168 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm3489-201ENSMUST00000190083 528 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm37191-201ENSMUST00000193346 388 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm18591-201ENSMUST00000220568 763 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm10095-201ENSMUST00000222765 483 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm37342-201ENSMUST00000194588 4965 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm44624-201ENSMUST00000208700 2278 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm24142-201ENSMUST00000101960 107 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm25795-201ENSMUST00000104421 132 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm14349-201ENSMUST00000137155 902 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm16260-201ENSMUST00000155141 304 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm25065-201ENSMUST00000177914 132 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm25891-201ENSMUST00000180050 132 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm8826-201ENSMUST00000193161 948 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm43765-201ENSMUST00000196303 893 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm7570-201ENSMUST00000215246 698 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm46191-201ENSMUST00000218899 433 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 AC125190.2-201ENSMUST00000221160 497 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 AC115357.1-201ENSMUST00000227575 466 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm26437-201ENSMUST00000082595 105 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm26063-201ENSMUST00000083378 107 ntBASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Brf1Q8CFK2 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.34□□□□□ -1.24
Brf1Q8CFK2 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Brf1Q8CFK2 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Gm45633-201ENSMUST00000210669 3253 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.33□□□□□ -1.24
Brf1Q8CFK2 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms