Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.92□□□□□ -1.46
Ccdc28bQ8CEG5 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm15216-201ENSMUST00000118058 277 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12099-201ENSMUST00000118660 750 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm2199-201ENSMUST00000119065 874 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm15801-201ENSMUST00000120920 522 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm23894-201ENSMUST00000158107 313 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm23343-201ENSMUST00000158964 143 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm8783-201ENSMUST00000159764 522 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm6223-201ENSMUST00000178436 871 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm1972-201ENSMUST00000181606 964 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm43664-201ENSMUST00000196038 734 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm42428-201ENSMUST00000198677 302 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm4585-201ENSMUST00000207218 452 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm2614-201ENSMUST00000223227 403 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC131117.2-202ENSMUST00000224539 547 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC161275.1-201ENSMUST00000224668 208 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 AC154323.2-201ENSMUST00000226557 1151 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm5582-201ENSMUST00000075251 522 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc28bQ8CEG5 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm26300-201ENSMUST00000102282 94 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm24541-201ENSMUST00000103871 96 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm11447-201ENSMUST00000118983 858 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12174-201ENSMUST00000119853 813 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm14831-201ENSMUST00000120253 409 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm7212-201ENSMUST00000120817 348 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm7019-201ENSMUST00000194122 369 ntBASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28bQ8CEG5 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms