Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm8979-201ENSMUST00000183386 7296 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm38248-201ENSMUST00000193744 5783 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm26143-201ENSMUST00000104480 108 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm22371-201ENSMUST00000104588 130 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm15781-201ENSMUST00000120216 323 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm6067-201ENSMUST00000121648 491 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm24395-201ENSMUST00000158139 125 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm43157-201ENSMUST00000198223 412 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Trdv3-201ENSMUST00000198551 309 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm42516-201ENSMUST00000198691 767 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 AC161250.1-201ENSMUST00000213426 1111 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 AC153532.1-201ENSMUST00000218126 1111 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm34165-201ENSMUST00000222012 1174 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 AC166574.7-201ENSMUST00000228502 704 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Vps53Q8CCB4 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Vps53Q8CCB4 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Vps53Q8CCB4 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Vps53Q8CCB4 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.21□□□□□ -1.25
Vps53Q8CCB4 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Vps53Q8CCB4 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Vps53Q8CCB4 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Vps53Q8CCB4 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
Vps53Q8CCB4 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm23739-201ENSMUST00000102295 108 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm14356-201ENSMUST00000118322 869 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm13455-201ENSMUST00000118767 517 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm16511-201ENSMUST00000120019 564 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm7212-201ENSMUST00000120817 348 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm25433-201ENSMUST00000158283 286 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm23116-201ENSMUST00000158481 67 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm20778-201ENSMUST00000178524 627 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm27960-201ENSMUST00000183445 184 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm37511-201ENSMUST00000192901 294 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Ighv1-27-201ENSMUST00000194473 340 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms