Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Kcna2-202ENSMUST00000196403 2430 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Psen1-202ENSMUST00000101225 3023 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm14825-201ENSMUST00000113538 701 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm14470-201ENSMUST00000119085 466 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Defa-ps17-201ENSMUST00000121849 171 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm16152-202ENSMUST00000143261 1189 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Tpsab1-202ENSMUST00000153118 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm22881-201ENSMUST00000157747 134 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm23899-201ENSMUST00000158112 90 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm24819-201ENSMUST00000175094 166 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm22396-201ENSMUST00000177110 53 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm4307-201ENSMUST00000177945 910 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm28233-201ENSMUST00000189360 356 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm43804-201ENSMUST00000198280 456 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Alg14-204ENSMUST00000199554 441 ntTSL 3 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm44076-201ENSMUST00000203072 520 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm35931-201ENSMUST00000203931 448 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm45676-201ENSMUST00000211306 715 ntTSL 3 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm4303-201ENSMUST00000218922 910 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm4305-201ENSMUST00000219159 910 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm7986-201ENSMUST00000221336 551 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 AC133203.1-201ENSMUST00000228241 301 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Olfr1373-201ENSMUST00000078264 936 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Catspere1-201ENSMUST00000194528 2949 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Gm38236-201ENSMUST00000192661 3229 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Zfp672-203ENSMUST00000065533 2619 ntBASIC8.99□□□□□ -0.97
Trim35Q8C006 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim35Q8C006 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim35Q8C006 Ephx2-203ENSMUST00000225309 2032 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Rabep1-204ENSMUST00000108533 2791 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm37315-201ENSMUST00000194347 3479 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Ubxn8-201ENSMUST00000095349 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm4640-201ENSMUST00000203927 2352 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm35808-201ENSMUST00000204769 2602 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Vmn2r54-201ENSMUST00000086210 2421 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm24607-201ENSMUST00000104373 133 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm14278-201ENSMUST00000117381 878 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm8202-201ENSMUST00000117682 310 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm9043-201ENSMUST00000119677 314 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm16210-201ENSMUST00000122161 610 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm13203-201ENSMUST00000139895 520 ntTSL 3 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Snhg12-206ENSMUST00000153474 606 ntTSL 2 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm22765-201ENSMUST00000158371 128 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm25365-201ENSMUST00000158852 121 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm17228-201ENSMUST00000165006 491 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 n-R5s210-201ENSMUST00000177688 119 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm36999-201ENSMUST00000192756 1046 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Cox19-207ENSMUST00000198966 475 ntTSL 3 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC8.98□□□□□ -0.97
Trim35Q8C006 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim35Q8C006 AC162893.1-201ENSMUST00000207732 1085 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm45619-201ENSMUST00000210360 528 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC8.98□□□□□ -0.97
Trim35Q8C006 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim35Q8C006 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim35Q8C006 AC125350.3-202ENSMUST00000224295 457 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 AC102815.2-201ENSMUST00000227837 541 ntBASIC8.98□□□□□ -0.97
Trim35Q8C006 Lkaaear1-201ENSMUST00000052416 718 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim35Q8C006 Gm10577-201ENSMUST00000097954 399 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms