Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm18330-201ENSMUST00000199246 547 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm43798-201ENSMUST00000202056 394 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 AL669819.1-201ENSMUST00000225143 330 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm18310-201ENSMUST00000206494 3912 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Malat1-201ENSMUST00000172812 6983 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm26984-201ENSMUST00000182345 3510 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm42873-201ENSMUST00000196110 1726 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm14755-201ENSMUST00000118037 384 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm5073-201ENSMUST00000118222 820 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm4342-201ENSMUST00000118982 367 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm13013-201ENSMUST00000119087 523 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm14115-201ENSMUST00000119242 482 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm11198-201ENSMUST00000119771 974 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm5809-201ENSMUST00000121854 529 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm9671-201ENSMUST00000171502 547 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Mir5125-201ENSMUST00000175240 79 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Mir3097-201ENSMUST00000175356 67 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Mir6971-201ENSMUST00000183497 63 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm29111-201ENSMUST00000188823 696 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm28584-201ENSMUST00000191489 696 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm38138-201ENSMUST00000193274 696 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm37991-201ENSMUST00000194297 696 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm38268-201ENSMUST00000195813 193 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm18985-201ENSMUST00000196472 1079 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm45026-201ENSMUST00000205292 833 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm18597-201ENSMUST00000209519 694 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm18043-201ENSMUST00000216741 739 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 AC120394.1-201ENSMUST00000217153 351 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 AC170810.1-201ENSMUST00000228267 672 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm45117-201ENSMUST00000207250 1774 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp40Q8BWR4 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 AC153971.1-201ENSMUST00000215097 3811 ntBASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp40Q8BWR4 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms