Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm15715-201ENSMUST00000118032 283 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm7768-201ENSMUST00000222988 597 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.96□□□□□ -1.3
Nup98Q6PFD9 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm14836-201ENSMUST00000118567 471 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm12936-201ENSMUST00000121439 301 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm22420-201ENSMUST00000178795 126 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm28017-201ENSMUST00000183434 126 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm38384-201ENSMUST00000195413 1122 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm38670-201ENSMUST00000199248 77 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm17994-201ENSMUST00000209260 533 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm18591-201ENSMUST00000220568 763 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.95□□□□□ -1.3
Nup98Q6PFD9 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup98Q6PFD9 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm11197-201ENSMUST00000145158 839 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm3216-201ENSMUST00000166927 486 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm3141-201ENSMUST00000168726 499 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm27855-201ENSMUST00000184122 128 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm37336-202ENSMUST00000193705 468 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm43467-201ENSMUST00000197441 437 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm18850-201ENSMUST00000211578 388 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm14871-201ENSMUST00000119056 194 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.94□□□□□ -1.3
Nup98Q6PFD9 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms